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Abstract
Acoustic telemetry is the passing of information across open ocean using high-frequency transmissions, but the environment between transmitter and receiver can dramatically change signal detection rates.Shallow coastal reef environments vary on predictable time scales, with nocturnal and seasonal snapping
shrimp behavior driving background noise. A combination of gliders, moored transceivers, hydrophones,
and a surface buoy were used during this 2020 experiment to define the physical and acoustic environment as a medium for telemetry signals to provide context for collected detections. A large portion of the
variability in detection efficiency was found to be controlled by background noise levels: the snapping
shrimp activity at night and in warmer waters resulted in less successful transmission detections, while efficiency improved during the daytime and during colder months. Wind appeared to have a strong enabling
effect, lowering high-frequency noise and increasing detection efficiency, suggesting either a change in
noise created (biotic, shrimp behavior) or a change in noise lost (abiotic, attenuation). Snapping shrimp
activity was quantified using passive recordings of the benthic environment. Surface bubble loss was
calculated to estimate how much noise was lost at the air-sea interface as winds increased, and this loss
was often a significant source of attenuation. Snapping shrimp were unaffected by increased winds, but
the noise they created was attenuated at the ocean surface. Previous attempts at modeling acoustic propagation were simplistic, prioritizing speed, and did not account for the aforementioned attenuation or
background noise. By including estimates of realistic noise and signals strength, the transmission models
were improved and are more accurate representations of the reef environment. The wind-driven attenuation of background noise was the largest predictor of detectability. Effects from strong wind lowered
detection efficiency when background noise was low and static, but significantly increased detectability
in environments where wind lowered the detection threshold. This work can aid acoustic telemetry users
working near coastal reefs. Reefs are biologically important habitats, but noise-creating species like snapping shrimp can hinder research efforts. Accounting for variable levels of background noise and signal
strength helps temper expectations and add context to collected detection data.